Category Archives: publishing

The Immortal Consenting of Henrietta Lacks

Rebecca Skloot has an essay in today’s New York Times discussing the recent publication of the genome sequence of a widely used human cell line. Skloot, as most of you already know, wrote a book about the history this cell line  - known as HeLa for Henrietta Lacks, the woman from whom they were obtained. In [...]

Also posted in bioethics, race, science | 40 Responses

Retraction action, what’s your faction: the dangers of citation worship

If you ask scientists to list words they are most afraid to hear associated with their work, I suspect “retraction” would rank high on the list. Retraction is a kind of death sentence, applied only when papers contain serious methodological errors or were tainted by fraud. So the recent retraction of a PLoS Pathogens paper [...]

Also posted in science | Tagged | 13 Responses

This 100,000 word post on the ENCODE media bonanza will cure cancer

It is oddly fitting that the papers describing the results of the NIH’s massive $200m ENCODE project were published in the midst of political convention season. For this was no typical scientific publication, but a carefully orchestrated spectacle, meant to justify a massive, expensive undertaking, and to convince us that we are better off now [...]

Also posted in ENCODE, NOT junk, science | 43 Responses

The Glacial Pace of Change in Scientific Publishing

I was excited today when my Twitter stream started lighting up with links to an article titled “The Glacial Pace of Scientific Publishing: Why It Hurts Everyone and What We Can Do To Fix It“. Sounded right up my alley. I was even more excited when I clicked and saw that it was written by [...]

Posted in publishing | 14 Responses

How President Obama could really lead on open access

[The Washington Post ran a nice op-ed today from two student leaders linked to the recent public access petition campaign. I had submitted one that urges the administration to take a more agressive stance, which I am posting here.] Last weekend, a “We the People” petition calling on the Obama administration to provide free access [...]

Also posted in science, science and politics | 5 Responses

What the UC “open access” policy should say

The joint faculty senate of the ten campuses of the University of California has floated a trial balloon “open access” policy. I, of course, laud the effort to move the ball forward on open access, but the proposed policy falls short in two key ways. 1) The rights reserved by the University are too limited. [...]

Also posted in open access, PLoS | 6 Responses

20 years of cowardice: the pathetic response of American universities to the crisis in scholarly publishing

When Harvard University says it can not afford something, people notice. So it was last month when a faculty committee examining the future of the university’s libraries declared that the continued growth of journal subscription fees was unsustainable, even for them. The accompanying calls for faculty action are being hailed as a major challenge to the traditional publishers [...]

Also posted in open access, science | 27 Responses

The AAAS believes the public should read press releases not papers

There’s been a lot of media coverage of and discussion about a recent paper from Bert Vogelstein and Victor Velvulescu about the utility of whole-genome sequencing to predict disease. Using previously published data on disease occurrence in identical twins, and a relatively simple mathematical model, the authors conclude that not only isn’t sequencing very useful for [...]

Also posted in genetics, open access, science | 8 Responses

Xenophobic scientific publishers: open access aids foreign enemies

The American Association of Publishers and the anti-open access DC Principles group have sent letters to both houses of Congress outlining why they oppose the Federal Research Public Access Act, which would make the results of all federally funded research publicly available. They largely trot out the same tired “not all publishers are alike, so don’t impose [...]

Also posted in open access, PLoS, politics, science, science and politics | 12 Responses

We won the Battle of the Research Works Act. Now let’s win the War for Open Access.

Late last year Elsevier and two of its allies in Congress quietly introduced a bill that would have halted the trend towards increased public access to the results of government funded research headlined by the NIH’s Public Access Policy. This brazen act, which its backers hoped would pass unnoticed in the quiet of the holidays, [...]

Also posted in open access, PLoS, politics, science, science and politics | 14 Responses